PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001070.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 67aa    MW: 7511.44 Da    PI: 7.6144
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001070.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.4e-11267464
                               E-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TT CS
                         B3  4 vltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkG 64
                               +ltpsd+++ + +++p+ +a+++        +++ +  tl+++d++g  W++++iyr++++r++lt+G
  Rmu_sc0001070.1_g000019.1  2 ILTPSDANNGDGFSVPRFCADSIfpplnyqAEPPVQ--TLSVTDLHGGGWDFRHIYRRTPRRHLLTTG 67
                               589*****************999****985444444..9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MILTPSDANN GDGFSVPRFC ADSIFPPLNY QAEPPVQTLS VTDLHGGGWD FRHIYRRTPR  60
RHLLTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.13e-34ARF family protein