PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001072.1_g000024.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 141aa    MW: 15508.3 Da    PI: 8.6038
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001072.1_g000024.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66e-17741135
                       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                               C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  Rmu_sc0001072.1_g000024.1  7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
                               ****************88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLVNYTPLHA RAEPEDYEDH  60
RVSRMKSMSI NKNKEVKLVK RKQHPDSVVV GADYSHGFRK VVDEDTSNRS SSGSAVSNTE  120
SCAHFGSADA SDLTGRILCD N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.34e-56GATA family protein