PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001137.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 215aa    MW: 24039.4 Da    PI: 8.6206
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001137.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.98.3e-2344101259
                                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                +Dgy+W+KYGqK +k+    rsY++C  ++C++kk+ e s+++p+ + ++Yeg Hnh+
  Rmu_sc0001137.1_g000010.1  44 EDGYEWKKYGQKFIKNVGKFRSYFKCQNSNCRAKKRAEWSSSEPDELRVVYEGVHNHT 101
                                7********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSDYRLILYR ETDHHDEDDQ IYGEGEEVQD NTSSGGSNKL VIPEDGYEWK KYGQKFIKNV  60
GKFRSYFKCQ NSNCRAKKRA EWSSSEPDEL RVVYEGVHNH TDNNASSAGS ASHSQQPDSS  120
SSLNPSTDAN RYDLYTQVFA MTSVGSLAAP SGRVGADKKF DTLSSRASIS SFSFSKRPNV  180
ALRRTRSPRV SAMAKELHFN KDGSAIKKLQ VSLFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.28e-16WRKY family protein