PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001159.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 142aa    MW: 16049.4 Da    PI: 6.7986
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001159.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.93.2e-1227117295
                                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkl 84 
                                + +lt+s+v    +l +p k      ++  ++   t+ +  g+sWe+++  ++ +++  + +k W  Fv++n+Lk+gD +vF+l
  Rmu_sc0001159.1_g000034.1  27 DVILTKSHVKPIYQLGIPAKLE-PV-LP--SGSIHTVLTFGGKSWEMTY--NGEKRHkQFDRKSWGAFVDENNLKAGDGLVFEL 104
                                5566677777777777776652.22.22..23356788899********..555555467899********************9 PP

                                -.SS.SEE..EEE CS
                         B3  85 d.gr.sefelvvk 95 
                                +  + ++  ++v+
  Rmu_sc0001159.1_g000034.1 105 KeCNsMQIGFRVQ 117
                                7444455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MAKSSSNPVV ELNGEEFWPL SGKPYFDVIL TKSHVKPIYQ LGIPAKLEPV LPSGSIHTVL  60
TFGGKSWEMT YNGEKRHKQF DRKSWGAFVD ENNLKAGDGL VFELKECNSM QIGFRVQILR  120
GDIPDELLEK ANREAEKPIF IQ