PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001207.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 158aa    MW: 17861 Da    PI: 4.6326
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001207.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.53.1e-1547105355
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55 
                                +R+t+t++ql++L+el++    ++p+ e+++ +  +l    +++ ++V++WFqN +a+e
  Rmu_sc0001207.1_g000019.1  47 NRWTPTPDQLRILQELYYDraLKNPTPEQIQGICLHLkpygQIENKNVFFWFQNLKARE 105
                                7****************96579***********************************97 PP
2Wus_type_Homeobox88.85.5e-2945107263
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 
                                +++RWtPtp+Q++iL+ely+ ++l++P+ e+iq i  +L+ yG+ie+kNVf+WFQN kaRe +
  Rmu_sc0001207.1_g000019.1  45 TNNRWTPTPDQLRILQELYYdRALKNPTPEQIQGICLHLKPYGQIENKNVFFWFQNLKAREYH 107
                                679***************9879**************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT PTPDQLRILQ  60
ELYYDRALKN PTPEQIQGIC LHLKPYGQIE NKNVFFWFQN LKAREYHQEI ETLPLFPMHG  120
EDIFGNMKTT SEGGSGYGGG SRISLELSLN SYGDADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-22WOX family protein