PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001208.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 87aa    MW: 10309.6 Da    PI: 6.2444
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001208.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.77.5e-13485277
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.d.iykvePwdLp.k..kvkaeek.ewyfFskrdkkyatgkrknra 77
                               p G+ FhPtdeelv ++L+++++  +   ++ i+e  +  ++ ePw    k    + +++  + fF+k +k +++gkr  r+
  Rmu_sc0001208.1_g000034.1  4 PIGYMFHPTDEELVGYFLQHRARMGNQFHSNEISEYsEfYCQEEPWVVWdKngGSSVDDRePLLFFTKLKKLNPNGKRFDRK 85
                               89*******************98877444466888843366779****6333422224442669**************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MGYPIGYMFH PTDEELVGYF LQHRARMGNQ FHSNEISEYS EFYCQEEPWV VWDKNGGSSV  60
DDREPLLFFT KLKKLNPNGK RFDRKVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.22e-09NAC family protein