PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001209.1_g000015.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 206aa MW: 22138.3 Da PI: 4.5473

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001209.1_g000015.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.8	3.2e-07	48	82	25	55
--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS Homeobox 25 psaeereeLAkkl....gLterqVkvWFqNrRake 55 p +e+++ + +l +++ ++V++WFqN +a+e Rmu_sc0001209.1_g000015.1 48 PVTEQIQGICLHLkpygQIENKNVFYWFQNLKARE 82 88899999999999999****************97 PP
2	Wus_type_Homeobox	56.5	6.5e-19	47	85	26	64
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +P +e+iq i +L+ yG+ie+kNVfyWFQN kaRe qk Rmu_sc0001209.1_g000015.1 47 QPVTEQIQGICLHLKPYGQIENKNVFYWFQNLKARESQK 85 799*********************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MEPRTLQLME LQTQQQTELQ AQQLTEEGGS NQAAGTPGVV PTHLSGQPVT EQIQGICLHL 60 KPYGQIENKN VFYWFQNLKA RESQKLKEIR NVRVGGSLDL KFGSTSSTEG GRSIDLNFGS 120 TDSTGDDGSL DLTLGLRSFM ERRGGDHQEV ETLPLFPEHG ENILGNPKTT SEGGSSFGYY 180 SGGSGSYNSG SPVSLELSLN PSGAAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	3e-14	WOX family protein