PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001211.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 221aa    MW: 25335.1 Da    PI: 5.0543
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001211.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.5e-141663148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g+W + Ed++ +d+vk++G g W + +r+ g++R++k++++rw++yl
  Rmu_sc0001211.1_g000005.1 16 KGAWAASEDQIVIDYVKKHGVGKWGKLSRETGLKRCGKSVRLRWLNYL 63
                               799*******************************************97 PP
2Myb_DNA-binding29.32e-0969106147
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                rg+ T++E+el+++++k+lG++        ++ gRt++++k++w++ 
  Rmu_sc0001211.1_g000005.1  69 RGNITEDEEELIIRLHKLLGNR--------IP-GRTDNEIKNYWNSC 106
                                7999****************99........**.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MGESSTCYDK NEGPKKGAWA ASEDQIVIDY VKKHGVGKWG KLSRETGLKR CGKSVRLRWL  60
NYLRPGIVRG NITEDEEELI IRLHKLLGNR IPGRTDNEIK NYWNSCLKRK LQQQNHLAVP  120
RNEEIREDLS SSAAVAAAAE KNPHLTGNNV NEDEDYHQHH DVDFGVGIEF EATDNNNGTG  180
DDEHLRDDLW WNNFIMDLND IQLDASEFQP DFPEIRLGNL W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.15e-44MYB family protein