PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001287.1_g000018.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

CAMTA

Protein Properties

Length: 243aa MW: 27919.4 Da PI: 9.8189

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001287.1_g000018.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	143.7	5e-45	20	124	2	107
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 + k+rwl++ ei ++L+n+++ +e++++p+sgsl Ly+r ++r frkDGy wkk kdgk+v+E+he+LK +gve+l+cyY Rmu_sc0001287.1_g000018.1 20 SQAKHRWLRPAEIFEVLHNHSRLC-LSEPADKPSSGSLYLYDRNVLRSFRKDGYRWKKTKDGKAVKEAHERLKAKGVEALHCYY 102 4569****************66.6799*************************************************** PP CG-1 86 ahseenptfqrrcywlLeeele 107 ah+ en++fqrrcyw+++ + Rmu_sc0001287.1_g000018.1 103 AHGAENENFQRRCYWMIDDSAV 124 ***************99843 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAARKRQRLD DQLELPQILS QAKHRWLRPA EIFEVLHNHS RLCLSEPADK PSSGSLYLYD 60 RNVLRSFRKD GYRWKKTKDG KAVKEAHERL KAKGVEALHC YYAHGAENEN FQRRCYWMID 120 DSAVFAILLH LLFFFLPPQS PSTSSSRPQR ANRVGPELAA GGESELDVEG VRWRGDHDER 180 ERVAGGGNVG DRRGGGDGLR GGEEPDLADL RIADEEAERK QREEAEKEKK RKQESKKKKK 240 KNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	2e-47	CAMTA family protein