PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001291.1_g000045.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 168aa    MW: 18810 Da    PI: 8.6898
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001291.1_g000045.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.68.8e-183090257
                               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+++t++q+++L+e++ +  ++p+ e+ ++++ ++    +++ ++V++WFqN++ +e++
  Rmu_sc0001291.1_g000045.1 30 STRWAPTTDQIRILKEFYDNgGKNPTPEQVQRITLQMkrygQVENKNVFYWFQNHKSRERQ 90
                               58*****************99**************************************97 PP
2Wus_type_Homeobox104.37.9e-342992265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW+Pt++Qi+iL+e y++G ++P+ e++qrit ++++yG++e+kNVfyWFQN+k+Rerqk+
  Rmu_sc0001291.1_g000045.1 29 SSTRWAPTTDQIRILKEFYDNGGKNPTPEQVQRITLQMKRYGQVENKNVFYWFQNHKSRERQKK 92
                               689***********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEPQTQQPTE DGGSNKAVGS SANMHCRRSS TRWAPTTDQI RILKEFYDNG GKNPTPEQVQ  60
RITLQMKRYG QVENKNVFYW FQNHKSRERQ KKKLTSDVHV PIQRSGLVGG SINLNFGLTC  120
SAGVGGSIME QRGEDHQEIE TLPLFPMHGE DIFGNMKTTS EGGSGYGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-28WOX family protein