PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001426.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 94aa MW: 10187.4 Da PI: 4.0338

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001426.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	31.4	6.2e-10	2	42	36	66
TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgt..........s 66 qd LG+d++ k+++W +++ak+ai+el+ s Rmu_sc0001426.1_g000012.1 2 QDWLGYDRPCKAVDWVIKKAKAAIDELPPWnpnsisvqtiS 42 99**************************9955444443222 PP

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence
MQDWLGYDRP CKAVDWVIKK AKAAIDELPP WNPNSISVQT ISSPPEWSGG AGESEQLEFS 60 AGKDGVEAEV VNLWLPTIAS DQSLASGQSC LLDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	3e-12	TCP family protein