PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001522.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 116aa    MW: 13059.5 Da    PI: 8.2865
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001522.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP75.31.8e-2357106150
                        TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50 
                                a+g+kd+h k++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++W
  Rmu_sc0001522.1_g000029.1  57 ATGRKDSHNKVCTTKGPRDRSIRLVADTAIQFYDMQDRLGYDQPSKVVDW 106
                                589*********************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MVSSFPDLNH QDSNHLARPI PTAAASQSTF MHHRCFWTAS SSTASEIVEA QGHILRATGR  60
KDSHNKVCTT KGPRDRSIRL VADTAIQFYD MQDRLGYDQP SKVVDWPHRT ELNHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.21e-30TCP family protein