PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001527.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 407aa MW: 45581.4 Da PI: 9.5353

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001527.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99	3e-31	341	398	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh+ Rmu_sc0001527.1_g000020.1 341 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 398 99*********************9988**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MVGPALQMCD TDGRFDSTNS NKDPVVDFDL LASSLIPKSM VCWEKWDSGY LGGRGFDMEE 60 VEEANKAAVA SCHRVLNLLS QPQDQVQFRN LKAETGEAVF RFKKVASLLN TGLGHARVRK 120 LKKLQIPFPE SVLLDNPNCT TDHHSKNPHF LQSRFAENPT QDLSLNVRNS LSLGNPSLEL 180 STNGKTPIQL QQALPAHYHF LQQQQQHQQQ QQQQRLLLQQ QHMKQQAEMM YRRSNSGINL 240 NFDSSSCTPT MSSTRSFISS LSIDGSVANL EGNSFHLIGA PISSSDQNSQ HKRKCSARGD 300 DGSAKCGSSG RCHCSKKRKH RVKRSIKVPA ISNKLADIPP DDYSWRKYGQ KPIKGSPHPR 360 GYYKCSSMRG CPARKHVERC LEEPSMLIVT YEGEHNHPRI PSQSTTT

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MVGPALQMCD TDGRFDSTNS NKDPVVDFDL LASSLIPKSM VCWEKWDSGY LGGRGFDMEE  60
VEEANKAAVA SCHRVLNLLS QPQDQVQFRN LKAETGEAVF RFKKVASLLN TGLGHARVRK  120
LKKLQIPFPE SVLLDNPNCT TDHHSKNPHF LQSRFAENPT QDLSLNVRNS LSLGNPSLEL  180
STNGKTPIQL QQALPAHYHF LQQQQQHQQQ QQQQRLLLQQ QHMKQQAEMM YRRSNSGINL  240
NFDSSSCTPT MSSTRSFISS LSIDGSVANL EGNSFHLIGA PISSSDQNSQ HKRKCSARGD  300
DGSAKCGSSG RCHCSKKRKH RVKRSIKVPA ISNKLADIPP DDYSWRKYGQ KPIKGSPHPR  360
GYYKCSSMRG CPARKHVERC LEEPSMLIVT YEGEHNHPRI PSQSTTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	1e-115	WRKY family protein