PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001530.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 248aa MW: 27874.7 Da PI: 8.4632

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001530.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.3	2.5e-17	4	79	18	99
--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +pkkf++e+g+ s + l+ +sg +W+v++ +++ g+++++k+W eF k L gDf+vF+++g+sef +v +f++ Rmu_sc0001530.1_g000002.1 4 IPKKFVNEYGQC--LSNSVCLKLPSGSEWKVEV--TRSNGKVWFEKCWPEFSKFYSLSIGDFLVFEYEGDSEF--HVFIFDR 79 9******855..7889***********..********************************9999..9999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MQGIPKKFVN EYGQCLSNSV CLKLPSGSEW KVEVTRSNGK VWFEKCWPEF SKFYSLSIGD 60 FLVFEYEGDS EFHVFIFDRS TTEIDYPIKR PKMEEAPEDE FSVEILEDIP PSPKTREKTP 120 LPCRQSYKKM KTSLTGKADQ MFENENTEPF GNPKKNKDSH CSASKIKSVS GFPAKIDGGG 180 SSSTERFLKQ SPEFCGEKHT SNINEKALIQ RSIASKSEKP YFKVVMGGPT ICRAQAVPAQ 240 LRARAGPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-22	B3 family protein