PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001554.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 136aa    MW: 15505 Da    PI: 10.8996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001554.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.6e-094080954
                               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                r+RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  Rmu_sc0001554.1_g000001.1 40 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 80
                               69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MKEMIYRAAA FRPVNLGIEM VERPKRKNVK ISSDPQTVAA RQRRERISER IRVLQKLVPG  60
GSKMDTASML DEAANYLKFL RSQVKALENL GQKIDSMSNC LPPTSFAFSF NPSFPMQTHH  120
VPLHLNPNHN IHQPPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14146RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.12e-48bHLH family protein