PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001571.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 255aa MW: 29891.3 Da PI: 5.6756

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001571.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.2	3.7e-24	8	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk......kvkaeekewyfFskrdkkyatgkrknrat 78 ppG+rF+P e+l+v+yL++ ++g++++ ++ +d+y + ePw++ + +++++++yf +++++k+++gkr +r++ Rmu_sc0001571.1_g000004.1 8 PPGYRFRPDTEQLLVHYLRPILDGEDFPQ-GLVPFCDLYgEQEPWQIWDafkelcEKDQGRTDLYFITQHKTKTPKGKRISRTV 90 89**********************999.89*99346963255554333355688**************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+Wk +vls++++++g +k + + ++ ++++ +W+mhe++l Rmu_sc0001571.1_g000004.1 91 GRGTWKGDDAPGKVLSASQRVIGRRKRFHYK--NDGSTQNGRWLMHEFEL 138 ***********************9997..55556789*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAVHDDPPPG YRFRPDTEQL LVHYLRPILD GEDFPQGLVP FCDLYGEQEP WQIWDAFKEL 60 CEKDQGRTDL YFITQHKTKT PKGKRISRTV GRGTWKGDDA PGKVLSASQR VIGRRKRFHY 120 KNDGSTQNGR WLMHEFELDT SLLRNKRKAK DYVLCILRKN NRSVKKNSEG QEGQEEDEMS 180 WDGGDDQQDG DLPEPEFVEE ETTTTQRPDE LRKYVMEFEV YLKKQTADQA VKRKDHKDSH 240 KMSLEDIENH LMSDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	2e-17	NAC family protein