PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001576.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

LFY

Protein Properties

Length: 153aa MW: 16827 Da PI: 4.7139

Description

LFY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001576.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FLO_LFY	185	6.1e-57	1	153	1	148
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap...leaaaaaaarklr......eleelfkayGvryltvakiaelGftv 75 mdp+afsas+fkwd r +a++p+ r++ eaa+++++ ++aaaaaa +++r +le++f+ayGvry+t+a+ia+lGftv Rmu_sc0001576.1_g000017.1 1 MDPDAFSASMFKWDLRGMAVPPS-RVQLEAAAVAPQqaaAAAAAAAAGYSVRgprevvGLEDMFRAYGVRYYTAARIADLGFTV 83 9************98886655.5655555544442223334444455566999999********************** PP FLO_LFY 76 stLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeg 148 stL+dmkdeeldd+m+s+s+ fr++llvGeryGikaa+raerrrleee+ ++rr+ ls d+ +a+dalsqeg Rmu_sc0001576.1_g000017.1 84 STLLDMKDEELDDMMNSVSQFFRVELLVGERYGIKAAIRAERRRLEEED--SRRRHSLSGDT-NAMDALSQEG 153 *******************************************88..88888999996.68*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MDPDAFSASM FKWDLRGMAV PPSRVQLEAA AVAPQQAAAA AAAAAAGYSV RGPREVVGLE 60 DMFRAYGVRY YTAARIADLG FTVSTLLDMK DEELDDMMNS VSQFFRVELL VGERYGIKAA 120 IRAERRRLEE EDSRRRHSLS GDTNAMDALS QEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61850.1	3e-21	LFY family protein