PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001576.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 237aa    MW: 26455 Da    PI: 7.2524
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001576.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-1856105255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrdp+    + +r++lg+f tae Aa a+++a++k++g
  Rmu_sc0001576.1_g000029.1  56 HYRGVRQRP-WGKFAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALKFKG 105
                                7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSAMVSALSQ VISGNSSTDT NQNPALQLPQ QSGAAVLEHD QYHQQAPDQG SVRRRHYRGV  60
RQRPWGKFAA EIRDPKKAAR VWLGTFETAE AAALAYDEAA LKFKGSKAKL NFPERVQGTS  120
ELGGYLTTNT VAHQPLISDY HHQQLVYPNN IPNTGQYYPQ FYGNLNYGQT DQRIYYQPTT  180
SSSPPFIPIS QAQEEDQQQQ QALSFPMPAF GSSSSNLDPE YPQNNTTRNF DNSHSRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-28ERF family protein