PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001581.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 150aa    MW: 17386.8 Da    PI: 9.8538
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001581.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.5e-054468223
                               EET..TTTEEESSHHHHHHHHHH.T CS
                    zf-C2H2  2 kCp..dCgksFsrksnLkrHirt.H 23
                               kC    C ++F+ ksnL++H +  H
  Rmu_sc0001581.1_g000005.1 44 KCDyeGCLQTFTKKSNLRQHVKAvH 68
                               688889**************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MPESHIQSCH QHTTCEICGT KQLKKNIKSH LRTHEEGGSM ERIKCDYEGC LQTFTKKSNL  60
RQHVKAVHLE NKPFVCCFPG CGKRFAYKHV KDNHEKRGCH VHAHGDFEEA DEKFRSRPRG  120
GRKRQCPTVE MLVRKRVSPS KQSRQGSENF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.12e-59C2H2 family protein