PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001618.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 218aa MW: 24560 Da PI: 4.4893

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001618.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.5	7e-06	67	97	31	57
HHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 31 eeLAkkl....gLterqVkvWFqNrRakekk 57 + + +l +++ ++V++WFqN +a e++ Rmu_sc0001618.1_g000017.1 67 QGICLHLkpygQIENKNVFFWFQNLKAHERQ 97 5555566666689**************9996 PP
2	Wus_type_Homeobox	48.5	2.2e-16	63	98	29	64
Wus_type_Homeobox 29 keeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + +iq i +L+ yG+ie+kNVf+WFQN ka erqk Rmu_sc0001618.1_g000017.1 63 RVQIQGICLHLKPYGQIENKNVFFWFQNLKAHERQK 98 579********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MTIFGWVEVL KKQQETRQVE LFSKEADWQR CGDDDGNDHK GIDCIDTIKD GVEYVEDNND 60 DYRVQIQGIC LHLKPYGQIE NKNVFFWFQN LKAHERQKLR EFRNVRVGGS LDLNFGSTSS 120 TDDGRSIDLN FGSTGSTSTD RSIDLNFGSR VGYGADGSIM EQRGEYHQEI ETLPLFPMHG 180 EDIFGNMKTT SEGGSGYGGG SRISLELSLN SYRDVDMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	5e-11	WOX family protein