PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001621.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 194aa MW: 21212.4 Da PI: 4.557

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001621.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.8	3.3e-07	37	70	28	57
HHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 28 eereeLAkkl....gLterqVkvWFqNrRakekk 57 ++++ + +l +++ ++V++WFqN +a+e++ Rmu_sc0001621.1_g000009.1 37 KQIQGICLHLrpygQIENKNVFFWFQNLKARERQ 70 677888888888889*****************97 PP
2	Wus_type_Homeobox	54.2	3.4e-18	36	71	29	64
Wus_type_Homeobox 29 keeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++iq i +L+ yG+ie+kNVf+WFQN kaRerqk Rmu_sc0001621.1_g000009.1 36 SKQIQGICLHLRPYGQIENKNVFFWFQNLKARERQK 71 68*********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MEPRTLQLME LQTQQHMELQ QQQPTEEGGS NQAAGSKQIQ GICLHLRPYG QIENKNVFFW 60 FQNLKARERQ KLKEIRNVRV GGSLDLKFGS TSSTDGGRSI DLNFGSTDST GDDGSIDLTL 120 GLQSFMERRG GDHQEVETLP LFPEHGEDIL GNPKTTSEEV NAFGYYSGGS GGYNSGSPVS 180 LELSLNPFGA ADLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	1e-12	WOX family protein