PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001650.1_g000018.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 192aa    MW: 22248.4 Da    PI: 9.4469
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001650.1_g000018.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF28.42.1e-0956100447
                                -SHHHHHHHHHHHHHHHHHHHHHHHH.HHT-EEEEEEE-TTSEEE CS
                     SRF-TF   4 enksnrqvtfskRrngilKKAeELSv.LCdaevaviifsstgkly 47 
                                ++ks+  v+fskRr+g++ KA  L+    d+++av+++s+  + y
  Rmu_sc0001650.1_g000018.1  56 KEKSKIDVSFSKRRKGLFGKAARLCKdFSDTRIAVLVVSKASRPY 100
                                5788899******************659***********987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MEATIGRKRK GRTHTSEEEE ENRMLKKKMQ TTLGRKRKEK THTSEEEEEN CRQTKKEKSK  60
IDVSFSKRRK GLFGKAARLC KDFSDTRIAV LVVSKASRPY AFGHSSVDEV LNDLYHIQPT  120
TTESIEGLNL MRHQHEQKML MVVKEEIENE LRACQTVEGL ASLREKYLKL DEDIKKRLRS  180
CSSEEISFEG GV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13540RKRKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G60920.19e-12M-type_MADS family protein