PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001689.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 91aa    MW: 10494.8 Da    PI: 11.398
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001689.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP63.77e-203684250
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50
                               + +kd+h k++T +g+RdR++Rl+a++a++f+d+qd+L + ++sk ++W
  Rmu_sc0001689.1_g000026.1 36 TSRKDSHNKVCTTKGPRDRSIRLVAHTAIQFYDMQDQLRYYQPSKVVDW 84
                               789********************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MTNFRNGSVT EIGRRTASSS TASEIVEAQG HILRATSRKD SHNKVCTTKG PRDRSIRLVA  60
HTAIQFYDMQ DQLRYYQPSK VVDWPRRTRR T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.21e-26TCP family protein