PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001711.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 82aa    MW: 9556.69 Da    PI: 4.6938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001711.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.72.4e-123980851
                        AP2  8 wdkkrgr.WvAeIrd.psengkr.krfslgkfgtaeeAakaaiaark 51
                               ++k+rgr W+AeIrd +     r  r++lg+f t+eeAa a++  + 
  Rmu_sc0001711.1_g000029.1 39 FNKRRGRkWAAEIRDqC-----RvVRVWLGTFQTEEEAAGAYDIEAI 80
                               89999999*******55.....58******************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MDELSTELDL EREGKLIMWN WGFEGWPDES GSGRTSAKFN KRRGRKWAAE IRDQCRVVRV  60
WLGTFQTEEE AAGAYDIEAI KF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-12ERF family protein