PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001711.1_g000030.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 87aa    MW: 9953.6 Da    PI: 10.4736
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001711.1_g000030.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.55.2e-1131754386
                   trihelix 43 ferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
                               + +++ qC++k+++l+kry+++k+++++  +  sss++++f+ ++
  Rmu_sc0001711.1_g000030.1 31 LPKTALQCRHKMKKLRKRYRAEKQRASRYpSRSSSSSWVLFHLMD 75
                               57899**********************997888999******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSVSHLSLCM LSFIFKDHVA AAKASAAPSL LPKTALQCRH KMKKLRKRYR AEKQRASRYP  60
SRSSSSSWVL FHLMDDMESD PDWGLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-11Trihelix family protein