PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001719.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 119aa    MW: 13592 Da    PI: 4.5959
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001719.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.62e-1350119478
                       FAR1   4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                                neY+k++GF  +k + ++sk  +e ++ ++ C++ g++++++      r++ +  +++Cka+l+vk+++dgkw+v
  Rmu_sc0001719.1_g000008.1  50 NEYGKMTGFAASKIACRRSKVAQEWVEVKYACTRFGTKRKTDA-----RNPLPGMKIDCKAMLHVKRRQDGKWVV 119
                                79**********************************9998765.....59***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MGLEIDLNLA TKEDDNYNED DMDDDNYNED GMNDDNYNED GVGEECGHSN EYGKMTGFAA  60
SKIACRRSKV AQEWVEVKYA CTRFGTKRKT DARNPLPGMK IDCKAMLHVK RRQDGKWVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.21e-19FAR1 family protein