PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001755.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 185aa    MW: 20558.8 Da    PI: 5.4862
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001755.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY315e-101402359
                               EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY 23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                               +Y+rCt +   gC+++k+v++ ++ pkv ++tY g+H+++
  Rmu_sc0001755.1_g000001.1  1 AYFRCTRKydqGCQATKQVQQVQDTPKVYKTTYIGNHTCR 40
                               6*****998899**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
AYFRCTRKYD QGCQATKQVQ QVQDTPKVYK TTYIGNHTCR NMIRGPQMIM GSTDPPTGDS  60
HAPPRSTVSS ESGSTPICNK KEHHGVHGGH LPSSSSMIPF VPVKKEECKE GTTSSGLTDN  120
LNDTSDVWPE FKDDHHHDFG FPETTVMSNE NAVSNMQFLD MDLVVKSINF ENEFDFDEAA  180
FPLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-16WRKY family protein