PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001791.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GRAS
Protein Properties Length: 735aa    MW: 82098.9 Da    PI: 6.1201
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001791.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS382.45.3e-1173627331374
                       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84 
                                l++lL+ cA+a+++gd +  ++lL+r++++asp gd mqR+a +f+ +L+ar+a+s++++y+al +++ts    +++l+a++lf
  Rmu_sc0001791.1_g000005.1 362 LRTLLTVCAQAIAAGDERTGNNLLKRIRQHASPVGDGMQRMACCFADGLEARMAGSGTQIYRALITKPTS---AADVLKAYHLF 442
                                5789***************************************************************999...9********** PP

                       GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLa 166
                                  ++P+ k+s++  N++I++  ++++r+HiiDf+i++G+QWp+L+q L+sRp+gpp+lRiTg++ p++g   +e++eetg+rLa
  Rmu_sc0001791.1_g000005.1 443 LAACPFKKLSNFFSNKTIMNVSKKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGPPKLRITGIDFPNPGfrPAERVEETGRRLA 526
                                ********************************************************************9*************** PP

                       GRAS 167 kfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns 250
                                ++Ae+++vpfef++ +a++++++++e+L+++++E+l+Vn++++l +llde+v +es+rd vL+l+++++P+v ++   +  +++
  Rmu_sc0001791.1_g000005.1 527 NYAETFKVPFEFDA-IAQKWDTIQIEDLKLDRDEVLVVNSIYRLRNLLDETVVVESPRDIVLNLIRKMNPDVYILGVVNGAYSA 609
                                **************.7******************************************************************** PP

                       GRAS 251 esFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaa 334
                                  Fl rf eal ++s+lfd+l++ +pr+  er+ +Ere++gre++nv+aceg+er+er et+++W+ r ++aG++++pl+++++
  Rmu_sc0001791.1_g000005.1 610 LFFLSRFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETYKQWQVRNRRAGLTQLPLNQEIM 693
                                ************************************************************************************ PP

                       GRAS 335 kqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                + ak  l+ ++ + + ++e+  +l++gWk+r ++++S+Wr
  Rmu_sc0001791.1_g000005.1 694 SIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSSWR 733
                                ***********888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MDQSLSELLE FRDQALSDSV YKKLDSGIGN GSGSSKVLGH KYATTVQVPP TQIPSDLAPH  60
LSMNSDGDSP EDCDFSDVVL KYISQMFIEE DMEEKTCMYQ ESAALHAAEQ SFYELIGEKD  120
PLPPDLTLAA DQNHESPDES HSLHSSCCST TSTSTSSSIR DCDLREFKSL NVASQSTSQS  180
SHASSHGTSN IVDGFVDSPV STLRVPDFFN ETDSIMQFKK GFEEASKFLP NGNSLIVDLE  240
SNTLLLKELK ADATDMLVKV DQKNDSEYSS AGSRRKKHSY HDDVLLEGER SNKQSSVSTE  300
SAVSPEMFDM VLLNCGQGES ALREALQNGT KKNKPQNGQS KGPSGGKSRG KKQGGKKDVV  360
DLRTLLTVCA QAIAAGDERT GNNLLKRIRQ HASPVGDGMQ RMACCFADGL EARMAGSGTQ  420
IYRALITKPT SAADVLKAYH LFLAACPFKK LSNFFSNKTI MNVSKKATRL HIIDFGIMYG  480
FQWPCLIQRL SSRPGGPPKL RITGIDFPNP GFRPAERVEE TGRRLANYAE TFKVPFEFDA  540
IAQKWDTIQI EDLKLDRDEV LVVNSIYRLR NLLDETVVVE SPRDIVLNLI RKMNPDVYIL  600
GVVNGAYSAL FFLSRFREAL FHFSTLFDML DMCVPRDIPE RMLIEREIFG REAMNVIACE  660
GSERIERPET YKQWQVRNRR AGLTQLPLNQ EIMSIAKDRL HAYYHKDFVI DEDGRWLLQG  720
WKGRIVYALS SWRAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein