PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001809.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 257aa MW: 27520.4 Da PI: 6.0221

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001809.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.5	2.6e-17	86	140	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK++ ++eLe v+ L eN++L +l ++++ Rmu_sc0001809.1_g000001.1 86 DIKRIRRMVSNRESARRSRRRKQQHLQELEGQVDILRVENSTLFMQLTDASQQYR 140 58*****************************************977766666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MNGFSSSGLT ETLLSPQNLT PKNSSLSATM DSQSSICVGT PTSAANPIGR DNQARGATSG 60 SSGDQSDEDD FEIEAGPCGD STNPLDIKRI RRMVSNRESA RRSRRRKQQH LQELEGQVDI 120 LRVENSTLFM QLTDASQQYR DADTNNRVLK SDVEALRAKV KLAEDMVARG SLTSSLNQLL 180 QGHLTTPQPL NPHTNLRGVA HVSPTITIHG EDTSYGGIAV SGQNSGVGLG NAAGITNSNM 240 STRIMSDTVS CVSTDMW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	108	RRSRRRKQ
2	103	108	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	3e-56	bZIP family protein