PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001809.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 351aa MW: 39083.8 Da PI: 9.1098

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001809.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.9	2.6e-55	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk Rmu_sc0001809.1_g000007.1 13 LPPGFRFHPTDEELITYYLMNKISDATFTG-RAIADVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWK 95 79***********************999.89***********99999*************************** PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +tgkdke++++ ++elvg+kktLvfy+grap+gek++Wvmheyr+ Rmu_sc0001809.1_g000007.1 96 TTGKDKEIFNSaTSELVGMKKTLVFYRGRAPRGEKSNWVMHEYRI 140 *****9878899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MSTGDHANKE DNLPPGFRFH PTDEELITYY LMNKISDATF TGRAIADVDL NKCEPWELPA 60 KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSATSE LVGMKKTLVF 120 YRGRAPRGEK SNWVMHEYRI HAKSSFRPSK DEWVVCRVFQ KSAGIKKYPP SNQSSSSSRA 180 ANPYNLELIG PSVNVVQSPI MQVGHEHQFP NYGRNYMTNA EMAELSRVLR GGGIATGSTS 240 SPINLPLLQP QFNYPNIGGG GFTISGLNLN LGGPSTQSNL RPMPPLHQPH QAMNHQQDVA 300 NSSMMSSTSG AVGQDQAGYG IDMNNGNVPA GNRYMNVVDH CVDLDNYWPS Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MSTGDHANKE DNLPPGFRFH PTDEELITYY LMNKISDATF TGRAIADVDL NKCEPWELPA  60
KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSATSE LVGMKKTLVF  120
YRGRAPRGEK SNWVMHEYRI HAKSSFRPSK DEWVVCRVFQ KSAGIKKYPP SNQSSSSSRA  180
ANPYNLELIG PSVNVVQSPI MQVGHEHQFP NYGRNYMTNA EMAELSRVLR GGGIATGSTS  240
SPINLPLLQP QFNYPNIGGG GFTISGLNLN LGGPSTQSNL RPMPPLHQPH QAMNHQQDVA  300
NSSMMSSTSG AVGQDQAGYG IDMNNGNVPA GNRYMNVVDH CVDLDNYWPS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-112	NAC family protein