PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001849.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 187aa    MW: 20506.2 Da    PI: 8.7099
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001849.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.51.2e-09144186142
                       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkre 42 
                                +fYn+YAk +GF vr+++++ s + +g++t+ ++vCs +gk++
  Rmu_sc0001849.1_g000001.1 144 SFYNAYAKAMGFGVRNDYKRLSiRITGRVTSLRLVCSAQGKSS 186
                                5******************999999***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MAAAAKQVQQ QLLEDENDRF FVAVHVGAGY HAPSNEKALR SAMKRACLAA ASILRQGSGR  60
CIDAVTAAIQ VLEVIDSRVG VRISSQNITL TKVTDPTGMD GSYESSMCNG SDCNEMQYKG  120
VRYDKLSTED LRRQEFKTVE EAESFYNAYA KAMGFGVRND YKRLSIRITG RVTSLRLVCS  180
AQGKSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-07FAR1 family protein