PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001878.1_g000013.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

BES1

Protein Properties

Length: 163aa MW: 17371.6 Da PI: 9.0743

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001878.1_g000013.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	121.5	1.1e-37	5	102	3	101
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaags 84 sg +++ E+E+++ RER+RRai++ki+ GLR++G+yklp raD+neVl+ L++eAGw+ve+DGttyr + + + + ++ Rmu_sc0001878.1_g000013.1 5 SGSGRSESEKEKTRIRERQRRAITTKIFHGLRKHGGYKLPPRADINEVLRHLAKEAGWLVEPDGTTYRSNKVLNccPACGISKA 88 6666788999**********************************************************4433333333333333 PP DUF822 85 sasaspesslqsslkss 101 s+ a + +++ +ss Rmu_sc0001878.1_g000013.1 89 STAAAIATPTP---SSS 102 33333333333...221 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MAGTSGSGRS ESEKEKTRIR ERQRRAITTK IFHGLRKHGG YKLPPRADIN EVLRHLAKEA 60 GWLVEPDGTT YRSNKVLNCC PACGISKAST AAAIATPTPS SSLVMGGGEC STTASPLRLP 120 EFNSSSSGTH LDCPLSLMSE GELHHLPEVR ASNHSTPVAS PHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.2	6e-19	BES1 family protein