PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001911.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 205aa    MW: 22983.2 Da    PI: 9.7489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001911.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.8e-144489454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                               +h+++Er+RRd++N+ f  Lr+++P+       K++Ka++L  A+ YI++L
  Rmu_sc0001911.1_g000019.1 44 SHSKAERQRRDKLNHLFYALRSVVPNV-----SKMDKASTLSDAIVYINKL 89
                               7*************************6.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MRKTVNLSGS SSDSGPYEST SNTRLKERGR SDKHVNANQD SPISHSKAER QRRDKLNHLF  60
YALRSVVPNV SKMDKASTLS DAIVYINKLK TTIEELEAKI QAKPKKPKVS IMIDNILDSQ  120
STSTAMEVHV DVQIVGSEAI IRVWCPNNQD NPCARLMNAL RDLELRIHRA SISSVNELIL  180
QDVMVRVPDG FASEEVIKTA IINRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.14e-39bHLH family protein