PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001926.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 223aa    MW: 24473.9 Da    PI: 4.7976
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001926.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.82.2e-143997355
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRake 55
                               +R+t+t+ ql++L+el++    ++p+ e+++ +  +l    +++ ++V++WFqN +a+e
  Rmu_sc0001926.1_g000007.1 39 NRWTPTPAQLRILQELYYDrgLKNPKPEQIQGICLHLkpygQIENKNVFFWFQNLKARE 97
                               7****************9657************************************97 PP
2Wus_type_Homeobox91.76.9e-3037100264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ely+ +Gl++P+ e+iq i  +L+ yG+ie+kNVf+WFQN kaRe qk
  Rmu_sc0001926.1_g000007.1  37 TNNRWTPTPAQLRILQELYYdRGLKNPKPEQIQGICLHLKPYGQIENKNVFFWFQNLKARESQK 100
                                679***************9879***************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MELQTQQHME LQQQQPTEEG GSNQAAGSSA NTPIRPTNNR WTPTPAQLRI LQELYYDRGL  60
KNPKPEQIQG ICLHLKPYGQ IENKNVFFWF QNLKARESQK LKEIWNVRVG GSLDLKFGST  120
SSTEGGRSID LNFGSTDSTG DDESIDLTLG LRSFMERRGG DHQEVETLPL FPEHGENILG  180
NPKTTSEGGS SFGYYSGGSC GYNSGSPVSL ELSLNSSGAT DLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-21WOX family protein