PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001952.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21494 Da    PI: 9.6861
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001952.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox45.11.7e-143090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ ++++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++W qN+Ra+ek
  Rmu_sc0001952.1_g000010.1 30 NTRWLPNRDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWIQNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox89.53.4e-292992264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW P+ +Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyW QN++aRe+ k
  Rmu_sc0001952.1_g000010.1 29 SNTRWLPNRDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWIQNQRAREKLK 92
                               789****************999***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPNRDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WIQNQRAREK LKNNKLTSDV QAPKQRSGLV GGSNNLNFGS  120
TSSAGVGGSI MEQRGEDHQE IKTLPLFPMH SEDIFGNMKT TSDGGGGHGG GSYISLELSL  180
SCEGKARKSF QSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-24WOX family protein