PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001969.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 155aa MW: 17104.6 Da PI: 10.8191

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001969.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.6	1.6e-24	47	92	2	47
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvk 47 pr rWtp LH++Fv+av+ LGG+++AtPk+il++m+v+gLt++hvk Rmu_sc0001969.1_g000009.1 47 PRFRWTPHLHRCFVHAVDILGGEDRATPKKILRIMNVEGLTMNHVK 92 8********************************************9 PP
2	Myb_DNA-binding	36.2	1.4e-11	50	92	3	41
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqck 41 rWT+ ++ +v+av lGg+ t+k+I r m+ +g+t +++k Rmu_sc0001969.1_g000009.1 50 RWTPHLHRCFVHAVDILGGEdraTPKKILRIMNvEGLTMNHVK 92 8*****************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MATNKVESSE GSFSRGSHNG EQLPAERTRP TGQLTAMVRP YVRSELPRFR WTPHLHRCFV 60 HAVDILGGED RATPKKILRI MNVEGLTMNH VKAIFSVGAS RGSENPNSSS DLPLRPPKAL 120 PYWRTLPASE LTPISSFSSL TAKPISSFAV SPPWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	5e-26	G2-like family protein