PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002011.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 204aa    MW: 22707.2 Da    PI: 5.6823
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002011.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.76e-162283257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                kR+t+t++ql++L+el++    ++p+ e+++ +  +l    +++ ++V+ WFqN +a+e++
  Rmu_sc0002011.1_g000004.1 22 NKRWTPTPDQLRILQELYYDraLKNPTPEQIQGICLHLkpygQIENKNVFSWFQNLKARERQ 83
                               59****************96579*************************************97 PP
2Wus_type_Homeobox92.53.9e-302184264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               +++RWtPtp+Q++iL+ely+ ++l++P+ e+iq i  +L+ yG+ie+kNVf WFQN kaRerqk
  Rmu_sc0002011.1_g000004.1 21 TNKRWTPTPDQLRILQELYYdRALKNPTPEQIQGICLHLKPYGQIENKNVFSWFQNLKARERQK 84
                               679***************9879*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MEETTKQPGL GSSANTPIRP TNKRWTPTPD QLRILQELYY DRALKNPTPE QIQGICLHLK  60
PYGQIENKNV FSWFQNLKAR ERQKLREFQN VRVSGSLDLN FGSTSSTDDG RSIDLNFGST  120
GSTCTDRSID LNFGSCVGYG VDGSIMEQRG EYHQKIETLP LFPMHGEDIF GNMKTTSEGG  180
SGYGGGSHIS LELSLNSYRD ADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-24WOX family protein