PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002030.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 349aa MW: 38130 Da PI: 7.303

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002030.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27	1e-08	191	238	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr++r NR +A rs +RK + eLe+kv++L++e ++L ++ l Rmu_sc0002030.1_g000004.1 191 KRAKRILANRQSAARSKERKVRYANELERKVQTLQTEATTLSAQVTLL 238 9****************************************9888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDSNSNNNSH SFTSPTSSTD IEQMPETPHR GGSYHRRAHS DFSSFRLPNF DDLLLFDPSD 60 LDLSSFPSPS PVPPPRGTSN SNSNSAAAAV PMPIDSDDSS ASRPRPSSSS GPSAAAAHFR 120 SLSVDSDFFD GLALAGDAGG KEVVGGKRAG GGHHRHSNSM DGSFDSELSL DGLKKSITPD 180 KLAELSLIDP KRAKRILANR QSAARSKERK VRYANELERK VQTLQTEATT LSAQVTLLQR 240 DTTAITAENK ELKIRLQSME QQAQLRDALN EKLKEEVERL KIETSQIPHG SGNPFYRGLP 300 PQYVPPQSAL HNQLGGSQSQ HQHQQLHMLH NQNVNGQPHP SFMDFNQRA

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDSNSNNNSH SFTSPTSSTD IEQMPETPHR GGSYHRRAHS DFSSFRLPNF DDLLLFDPSD  60
LDLSSFPSPS PVPPPRGTSN SNSNSAAAAV PMPIDSDDSS ASRPRPSSSS GPSAAAAHFR  120
SLSVDSDFFD GLALAGDAGG KEVVGGKRAG GGHHRHSNSM DGSFDSELSL DGLKKSITPD  180
KLAELSLIDP KRAKRILANR QSAARSKERK VRYANELERK VQTLQTEATT LSAQVTLLQR  240
DTTAITAENK ELKIRLQSME QQAQLRDALN EKLKEEVERL KIETSQIPHG SGNPFYRGLP  300
PQYVPPQSAL HNQLGGSQSQ HQHQQLHMLH NQNVNGQPHP SFMDFNQRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	152	GGKRAGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G43700.1	2e-59	bZIP family protein