PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002060.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 159aa    MW: 17611.8 Da    PI: 9.5435
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002060.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP92.11.2e-2855125273
                        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 
                                + +kdrhsk++T++g+Rd RvRl+a++a++f+d+qd+LG+d++sk+++  +++ak+ai+el+   +++ ++c
  Rmu_sc0002060.1_g000008.1  55 TDRKDRHSKVYTAKGPRDHRVRLVAHTAIQFYDVQDRLGYDRPSKAVDCVIKKAKAAIDELPPW-NPNINFC 125
                                679**********************************************************988.4444566 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MKYAGRKIGE SHNNLHHRAM TSSSAASRLG LGIRTASSSI ASEIAGVRGH ILRATDRKDR  60
HSKVYTAKGP RDHRVRLVAH TAIQFYDVQD RLGYDRPSKA VDCVIKKAKA AIDELPPWNP  120
NINFCSDNIF SDSVDIRPVG HAEREPPFLD GGDSEFFVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.24e-37TCP family protein