PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002080.1_g000046.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 216aa    MW: 24375.7 Da    PI: 10.8523
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002080.1_g000046.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.83.3e-173090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L++l+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0002080.1_g000046.1 30 NTRWLPTTDQIRILKKLYDVkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90
                               58****************95469*************************************9 PP
2Wus_type_Homeobox963.2e-312992264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW Pt++Qi+iL++ly+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k
  Rmu_sc0002080.1_g000046.1 29 SNTRWLPTTDQIRILKKLYDvKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLK 92
                               789*****************9****************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKKLYDVK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LKNNKLTSDV QVPAKMNQRA REKLKKKKLT  120
SDVQVPKQRL GLFGGSINLN FRSTSSAGVG GSIMEQRGED HQEIKTLPLF PMHGEDIFGN  180
MRTTSDGGGG HGGGSHISLE LSLSWVGKAR KSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-25WOX family protein