PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002083.1_g000041.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 205aa    MW: 23043.5 Da    PI: 4.5601
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002083.1_g000041.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox474.4e-151474357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                R+t+t++ql++L+el++    ++p+ e+++e+  +l    ++ +++V++WFqN +a e++
  Rmu_sc0002083.1_g000041.1 14 YRWTPTPDQLRILQELYYDkvLKNPTPEQIQEICLHLqqygQIGDKNVFFWFQNLKACERQ 74
                               6****************96679*********************************998885 PP
2Wus_type_Homeobox92.34.5e-301375364
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               + RWtPtp+Q++iL+ely+ + l++P+ e+iq+i  +L++yG+i+dkNVf+WFQN ka erqk
  Rmu_sc0002083.1_g000041.1 13 NYRWTPTPDQLRILQELYYdKVLKNPTPEQIQEICLHLQQYGQIGDKNVFFWFQNLKACERQK 75
                               68***************987899***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEPRTLQLME PTNYRWTPTP DQLRILQELY YDKVLKNPTP EQIQEICLHL QQYGQIGDKN  60
VFFWFQNLKA CERQKLREFR NVRVGGSLDL NFGSTSSTDN GRSIDLNFGS TGSTSTDRSI  120
DLNFGSRVGY GVDGSIMEQR GEYHQEIETL PLFPMHGEDI FGNMKTTSEG GRGYGWYSGG  180
WDDNNGGSCI SLELSLNSSG GADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-22WOX family protein