PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002105.1_g000033.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 457aa MW: 51230.8 Da PI: 8.6624

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002105.1_g000033.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.6	5.5e-08	366	412	17	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ Rmu_sc0002105.1_g000033.1 366 AQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMEN 412 89***********************************9998887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MILVASMPDD DPRRRRLRSR KPNLLHFSDG GDVEAFEIRL KLCLCQIRLA EQYNNQSNHL 60 GAATLSKPAC HSDRYLLWRG QVVMPSGVTR LKVMAWIVLT GYSGIGVDVL VAPSPVVTGQ 120 SSMANSKSSS NMRNLMYSGK HPLLPPKSPF PSVSPSYADY VFSPAIGSKT IQKPREGNAH 180 HQRTSSESLL IEEQPSWLDD LLNEPDTPIR RGGHRRSSSD SFAYVDAINV SNIDYSAQDE 240 YKYNNMFSAP SWGTQDFDPQ TDLRHASLYS ELNLVKQKNK AWESSVSAIS NPRSLSSVKD 300 NIVLHSSGSL STPQEADGVV STASEKQDQI ESGPHDAKAP SEKKDNSNAK PYASETDAKR 360 AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GTEVSAELEF LNQQNLILSM ENKALKQRLE 420 NIAQEQLIKY FLKHRELGRV KLFLEYMMYL VPIVMSE

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MILVASMPDD DPRRRRLRSR KPNLLHFSDG GDVEAFEIRL KLCLCQIRLA EQYNNQSNHL  60
GAATLSKPAC HSDRYLLWRG QVVMPSGVTR LKVMAWIVLT GYSGIGVDVL VAPSPVVTGQ  120
SSMANSKSSS NMRNLMYSGK HPLLPPKSPF PSVSPSYADY VFSPAIGSKT IQKPREGNAH  180
HQRTSSESLL IEEQPSWLDD LLNEPDTPIR RGGHRRSSSD SFAYVDAINV SNIDYSAQDE  240
YKYNNMFSAP SWGTQDFDPQ TDLRHASLYS ELNLVKQKNK AWESSVSAIS NPRSLSSVKD  300
NIVLHSSGSL STPQEADGVV STASEKQDQI ESGPHDAKAP SEKKDNSNAK PYASETDAKR  360
AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GTEVSAELEF LNQQNLILSM ENKALKQRLE  420
NIAQEQLIKY FLKHRELGRV KLFLEYMMYL VPIVMSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	20	RRRRLRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	5e-79	bZIP family protein