PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002119.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 261aa    MW: 29522.9 Da    PI: 5.0501
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002119.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.41.8e-291511532126
                        NAM  32 evikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfy 109
                                 vi e+d++k+eP +Lp+     +++a + ew+fF++++ ky++++r+nr+tk+gyWk tg+++ ++++ +++++g k+tL+fy
  Rmu_sc0002119.1_g000002.1  15 IVILEIDLCKYEPAELPAallgtETEAPDMEWFFFTRKAYKYNKSSRSNRSTKKGYWKITGNERGITARrSKSVIGKKRTLTFY 98 
                                4699*************5466655555667*************************************99566779********* PP

                        NAM 110 kgrapkgektdWvmhey 126
                                +grapk++kt+Wv+h  
  Rmu_sc0002119.1_g000002.1  99 QGRAPKSKKTSWVIHGH 115
                                **************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MQSGWFQKYT WINNIVILEI DLCKYEPAEL PAALLGTETE APDMEWFFFT RKAYKYNKSS  60
RSNRSTKKGY WKITGNERGI TARRSKSVIG KKRTLTFYQG RAPKSKKTSW VIHGHYLPGD  120
GVASYPKQAQ GDFVICLLKI RSDKKDSPVS NEGEPRSTSV SEMNQEGNEK LLFHQPQPLD  180
DCCSSALQSP VSQELEAVLQ TNVTNDDCNE LQSPFGDSDS YLLDGNEVST CDEDETVYDV  240
FPQLCDPPEQ NLDSRFGPHQ P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.15e-22NAC family protein