PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002119.1_g000031.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 983aa MW: 107736 Da PI: 6.8277

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002119.1_g000031.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.3e-16	232	276	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Rmu_sc0002119.1_g000031.1 232 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 276 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MSRHHLVLAL FALLLPLVKA FADSEVIVVG GWRPIENIGD PHVKEIAEFA VSEYSQSQKK 60 NLVFQSVVRG ETQVVAGIKY RLVISVKEGD SFENYEAVVW EKRWMKSLHL RDVNASDFAK 120 KSSGLFTPQH QQYRITVTTI SIVPIKFFEA IRSLQCRKLC RHRRVCGDNS GWCLSSGESS 180 HPPWKLKVLA SSSSGSFCSS SPFCPGPVMD NFSSGEDLIV KARKPYTITK QRERWTEEEH 240 NRFLEALKLY GRAWQRIEEH IGTKTAVQIR SHAQKFFSKL EKEAVSKGVP VGQSIDIDIP 300 PPRPKRKPSN PYPRKSSEAA PTWSTSHVGA KDGKLVSSAS SSHCKQAVDL EKGPLDERSS 360 GEEKLSYGKE NKDESCSEVF TLLSESHCSS VSSANKSSIP AQVVLRNACT FREFVPSVKK 420 VIPRDGNESY VTIELKGNEN LKKTDAKKIV QDNATREASK LENTNAFKLV QGEKADDLNC 480 SLPTDGMRST PTCPRNVPIH ILDGSVGECN QTTTPDLSFS FQDSVFHPMG KIRVQPNLFT 540 NPAASTTTTE HESNVSRSCI DQSFPAIPPP FTPFHHNQED YHSSLSSTFS SLIVSSLLQN 600 PAAHAAASFA ATFWPYTNVE NKEGSPACSA GGFPSSQMNS PPNMAAIAAA TVAAATAWWA 660 AHGLLPLCAP LQTSFSCPVP VPMTGVSSMD NDQAPAAETE KGQDSLQVPC LQDQLQDPEQ 720 SEAVQEQHSP PKSPTTTSSD SENGGAKPDI GSKADDNEDL ATTEVQDLNK AKSKKQVDRS 780 SCGSNTTSCS EVETDALEKQ EKGEEELKEP DINPASESSY RRTRSISNMS DSWKERHMND 840 SWKEVSEEGR MAFQALFSRE VLPQSFSPPP DLNDKGHQDT IEGQQNSGEK DGRSLMLDLN 900 SKAWAPFCHP EVEKIASPPG GLNSAGGLLT LGLGYGKLKA RRTGFKPYKR CSVEANENRV 960 ANASSHCEEK GPKRLRLEGE AST

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MSRHHLVLAL FALLLPLVKA FADSEVIVVG GWRPIENIGD PHVKEIAEFA VSEYSQSQKK  60
NLVFQSVVRG ETQVVAGIKY RLVISVKEGD SFENYEAVVW EKRWMKSLHL RDVNASDFAK  120
KSSGLFTPQH QQYRITVTTI SIVPIKFFEA IRSLQCRKLC RHRRVCGDNS GWCLSSGESS  180
HPPWKLKVLA SSSSGSFCSS SPFCPGPVMD NFSSGEDLIV KARKPYTITK QRERWTEEEH  240
NRFLEALKLY GRAWQRIEEH IGTKTAVQIR SHAQKFFSKL EKEAVSKGVP VGQSIDIDIP  300
PPRPKRKPSN PYPRKSSEAA PTWSTSHVGA KDGKLVSSAS SSHCKQAVDL EKGPLDERSS  360
GEEKLSYGKE NKDESCSEVF TLLSESHCSS VSSANKSSIP AQVVLRNACT FREFVPSVKK  420
VIPRDGNESY VTIELKGNEN LKKTDAKKIV QDNATREASK LENTNAFKLV QGEKADDLNC  480
SLPTDGMRST PTCPRNVPIH ILDGSVGECN QTTTPDLSFS FQDSVFHPMG KIRVQPNLFT  540
NPAASTTTTE HESNVSRSCI DQSFPAIPPP FTPFHHNQED YHSSLSSTFS SLIVSSLLQN  600
PAAHAAASFA ATFWPYTNVE NKEGSPACSA GGFPSSQMNS PPNMAAIAAA TVAAATAWWA  660
AHGLLPLCAP LQTSFSCPVP VPMTGVSSMD NDQAPAAETE KGQDSLQVPC LQDQLQDPEQ  720
SEAVQEQHSP PKSPTTTSSD SENGGAKPDI GSKADDNEDL ATTEVQDLNK AKSKKQVDRS  780
SCGSNTTSCS EVETDALEKQ EKGEEELKEP DINPASESSY RRTRSISNMS DSWKERHMND  840
SWKEVSEEGR MAFQALFSRE VLPQSFSPPP DLNDKGHQDT IEGQQNSGEK DGRSLMLDLN  900
SKAWAPFCHP EVEKIASPPG GLNSAGGLLT LGLGYGKLKA RRTGFKPYKR CSVEANENRV  960
ANASSHCEEK GPKRLRLEGE AST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	2e-54	MYB_related family protein