PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002131.1_g000031.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 137aa    MW: 14996.7 Da    PI: 4.3407
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002131.1_g000031.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H224.19.2e-084667223
                               EETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                               +C+ Cg sF+ +++Lk+H+++H
  Rmu_sc0002131.1_g000031.1 46 TCEECGASFKKPEYLKQHMQSH 67
                               6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MNTIHYMEAN TTGATDKLNE VDIESGEDEM EMAKASEEVV VQNSNTCEEC GASFKKPEYL  60
KQHMQSHSLE VGDIEGDAPS AKRLRMSSSD ALQDMISGEE LSFIWKYDAD PAAKATAATV  120
LGIQVGCGFR SNIPCRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.22e-09C2H2 family protein