PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002132.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 94aa    MW: 10637.9 Da    PI: 5.0235
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002132.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.93.9e-094783337
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl 37
                               +R+t+t+ ql++L+ l++   ++yp+ e+++e+  +l
  Rmu_sc0002132.1_g000009.1 47 NRWTPTPAQLRILQGLYYDkgHKYPTPEQIQEICLHL 83
                               7****************9557************8777 PP
2Wus_type_Homeobox507e-174590246
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkie 46
                               +++RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+ie
  Rmu_sc0002132.1_g000009.1 45 TTNRWTPTPAQLRILQGLYYdKGHKYPTPEQIQEICLHLKPYGQIE 90
                               679***************9889***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MEPRTLELME LQTQQQMELQ AQQPTEEGGS TQAAGSSANT PIRPTTNRWT PTPAQLRILQ  60
GLYYDKGHKY PTPEQIQEIC LHLKPYGQIE VSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-11WOX family protein