PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002147.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 210aa MW: 23853 Da PI: 7.0169

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002147.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.7	1.4e-21	50	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 Y+eY+ ++GFsvr+ + +k+ n+ +++ +++Cskeg++ +++ + e ++ r rtgC+ak++ +++++ w+ t ++ eH Rmu_sc0002147.1_g000004.1 50 LYCEYGARMGFSVRIMQRRKT--NNVVKQVNYCCSKEGFKLDSDPS-EVKKADRLDIRTGCTAKIRFGLQYNNLWKATLFVPEH 130 7*************98888..889************9999.99999**************************** PP FAR1 86 nHela 90 nH+la Rmu_sc0002147.1_g000004.1 131 NHKLA 135 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MPTLIDIEDD GEHSMGTALG KDSMFVNRQT SNDDDLYGVI VNSEEEAYNL YCEYGARMGF 60 SVRIMQRRKT NNVVKQVNYC CSKEGFKLDS DPSEVKKADR LDIRTGCTAK IRFGLQYNNL 120 WKATLFVPEH NHKLAELEER QFLHSNRKVS NAHQGVIRSM KTAGMSTINT YSYLAEEVGG 180 SQNVGFTKTD CYNFVSRDRM IMLEAGMLKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-21	FAR1 family protein