PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002183.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 227aa    MW: 25549.4 Da    PI: 8.9076
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002183.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox491e-153191357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+++t++q+++L+elF++   r p+ e+ +++  +l    +++ +++++WF N+Ra+ek+
  Rmu_sc0002183.1_g000004.1 31 TRWNPTTDQIRILKELFYNkgVRSPTIEQVQKICLQLkwygKIEFKNIYYWFVNQRAREKQ 91
                               8*****************7789*************************************97 PP
2Wus_type_Homeobox89.53.3e-292993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW+Pt++Qi+iL+el++ +G+r+P+ e++q+i  +L+ yGkie kN++yWF N++aRe+qk+
  Rmu_sc0002183.1_g000004.1 29 TSTRWNPTTDQIRILKELFYnKGVRSPTIEQVQKICLQLKWYGKIEFKNIYYWFVNQRAREKQKK 93
                               789**************98769*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MEPQTQQPTE DGGSNKEARS SANRLCRQTS TRWNPTTDQI RILKELFYNK GVRSPTIEQV  60
QKICLQLKWY GKIEFKNIYY WFVNQRAREK QKKRSTSDVH VPMQRSGLVG DDNVTNWKHE  120
DQYINFGSST SASTSSAGVM IAFNGQMGNY GGYGSMNMEI ETLPLFPIHG EDIFGNMKTT  180
SEGGGGYSYY SGGWGSYNGD SRISLELSLK SYGSTLFSRE GVFSAKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-30WOX family protein