PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002187.1_g000036.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 201aa    MW: 21337.6 Da    PI: 4.3307
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002187.1_g000036.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.2e-051533523
                               TTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  5 dCgksFsrksnLkrHirtH 23
                                Cg sF+ + +Lk+H+++H
  Rmu_sc0002187.1_g000036.1 15 TCGASFKKPAYLKKHMQSH 33
                               6****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAKAGEEVVV EKSNTCGASF KKPAYLKKHM QSHSPERLSD GTWRELRERI ATTILRGFEL  60
QLSIVESSDA EALEWLEKMV CCRFSANKAN QLRIEQNSNQ TDSPPPYCCA AIDDTRSASA  120
IKIIALDNGR LGDDHLVEPA DGGGEGGAAG LGPGEVEVIG EELSAGGGHE DRAGEGLELG  180
VGEGGDDGEA EAEKEIPQAR C