PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002226.1_g000025.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 243aa MW: 28444.5 Da PI: 8.4735

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002226.1_g000025.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.2e-20	36	132	2	90
FAR1 2 fYne.YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwe 77 fYne +Ak vGFsvr+ ++k+sk +geit++ f Cskegk+ e+ ++ ++ e+r+ +r+gCka+l++ +k ++kw+ Rmu_sc0002226.1_g000025.1 36 FYNEiFAKIVGFSVRMGSTKRSKITGEITWKLFLCSKEGKTYETYENsrrqhsSTMEERRCGIKRMGCKARLNIVFNKaSKKWC 119 888669********************************999988877777666666777899******99999* PP FAR1 78 vtkleleHnHela 90 v+++e+ H+Hel+ Rmu_sc0002226.1_g000025.1 120 VSDFEEAHTHELT 132 *********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MMGEPSLQET NENAIVDEPK LQLGQEFESI EEAYYFYNEI FAKIVGFSVR MGSTKRSKIT 60 GEITWKLFLC SKEGKTYETY ENSRRQHSST MEERRCGIKR MGCKARLNIV FNKASKKWCV 120 SDFEEAHTHE LTTPKRVHLL PSHRKLLTKA KKCLMEKLSS VNVRTSQQFK IMETVAGGIQ 180 NVGCIPRDLR NFERDSREEV KGHDATMLLE FLESEKERKP SFYFEVDRDE QNRMNRCFWA 240 DPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-31	FAR1 family protein